Backing up Skua's comments, all of the major marine epoxy formulations are similar in physical properties, so it's just a matter of price. Check out EpoxyProducts.com and Bateau.com for much lower priced goo's. Don't worry about amine blush or so called "non-blushing" formulations. The conditions you'll be working in will assure some blush, even with the fancier mixtures. In other words, just assume you'll have a blush and act accordingly. Wipe off any cured epoxy with a mild soapy water and a rag, dry it, then sand normally. Don't use solvents, it'll just smear the blush around. Blush is water soluble.
I wouldn't use PVC pipe for your "weep" holes. The best approach is to make them fairly over size, then back fill with thickened epoxy, covering and sealing the exposed end grain. When this is cured, drill them for the appropriate size weep (1.5" diameter minimum). They don't have to have 'glass wrapped around the hole, the epoxy will do. For what it's worth, you can't have enough weeps in most boat bilges.
If using plywood, it'll probably be dry enough right off the shelf, but if using solid wood or you have moisture content questions, anything below 15% will work, with 12% or less being preferred.
You can apply epoxy in any temperature you want. If it's cold outside, warm the work and the epoxy. Rig a tarp over the area or the whole boat and place some non-flame heaters inside it. The goo can be heated for a few seconds in a microwave. I know guys that build boats all winter in unheated shops, using epoxy, knowing it's not fully cured. They wait for the "false spring" to show up in February and drag the boat outside in the sun and let it "cook", which completes the cure. Of course, you can use the heated tent deal too, which is my approach.
The motor mount fasteners should be treated the same way as the weep holes. Drill an over size hole, fill with thickened goo and let it cure. When it is, drill for the fastener. The West System "User's Guides" cover "fastener bonding" pretty well, so have a look. A neat trick I use, is to carefully suspend a tooth pick in the center of the hole, just filled with thickened epoxy. When the goo cures, this will serve as the pilot hole for the next drill out, as the bit will follow the weakest path, which is the toothpick.